I am working on a design using a microcontroller using analogue inputs and digital I/O. The analogue pins can be swapped and the digital pins can be swapped at will (with commensurate changes in the firmware). I have set the swap levels on the part to allow this. I put short wires on each pin and named them and did likewise with the parts they connected to. The parts on the board layout are connected correctly but the layout would be better if some pins were swapped. So, on the schematic I swap some pins and the board layout correctly reflects the changes. The problem is that the schematic is now a mess wire wires draped all over the microcontroller. I tried using Bus/Net but the result is similar.
Is there a way of using pinswap without making a mess of the schematic?